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Schedule, Notes/Handouts & Videos

Mathematical Genomics April 13, 2009 - April 15, 2009

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Apr 13, 2009
Monday
02:30 PM - 04:00 PM
  *Discussion Panel*
Peter Bickel (University of California, Berkeley), David Galas (Institute for Systems Biology), Wing Wong (Stanford University), Rick Woychik
05:15 PM - 06:00 PM
  Detecting Differentially Methylated Regions with Microarray Data
Rafael Irizarry
07:00 PM - 07:45 PM
  Statistical Inference in mRNA-Seq
Sandrine Dudoit (University of California, Berkeley)
Apr 14, 2009
Tuesday
10:15 AM - 11:00 AM
  SNPs and Copy Number Variants in Autism – What are we Missing?
Lauren Weiss
11:15 AM - 12:00 PM
  Characterization of Allele-specific Copy Number in Tumor Genomes
Nancy Zhang (University of Pennsylvania)
12:00 PM - 12:45 PM
  A Bayesian Probabilistic Approach Toward Transforming Public Microarray Repositories Into Disease Diagnosis Databases
Haiyan Huang
02:45 PM - 03:30 PM
  Integrated Approaches to Mapping Genome to Phenome
Xianghong Zhou
04:00 PM - 04:45 PM
  L.Pachter Talk
Lior Pachter (University of California, Berkeley)
04:45 PM - 05:30 PM
  In vitro data and the analysis of ChIP-seq and ChIP-chip experiments
James Bentley Brown
Apr 15, 2009
Wednesday
09:30 AM - 10:15 AM
  "Chromosome organization and dynamics in C. elegans."
Abby Dernburg
10:15 AM - 11:00 AM
  Maximizing Information from Genetic Data
Greg Carter
11:30 AM - 12:15 PM
  'Genetics and systems medicine when n=1'
Joseph Nadeau
02:30 PM - 03:30 PM
  L. Hood Talk
Leroy Hood