Home /  MSRI/PMMB Short Course: Mathematical and Computational Challenges in Molecular and Cell Biology

Summer Graduate School

MSRI/PMMB Short Course: Mathematical and Computational Challenges in Molecular and Cell Biology June 12, 2000 - June 23, 2000
Parent Program:
Organizers Nicholas R. Cozzarelli, Michael Levitt, Wilma Olson, De Witt Sumners
Description No Description
Keywords and Mathematics Subject Classification (MSC)
Primary Mathematics Subject Classification No Primary AMS MSC
Secondary Mathematics Subject Classification No Secondary AMS MSC
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Schedule, Notes/Handouts & Videos
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Jun 12, 2000
08:00 AM - 05:00 PM
  Geometry and Topology of DNA
James White
08:00 AM - 05:00 PM
  Extracting Regulatory Motifs from Genomes and Microarray data
Eric Siggia
08:00 AM - 05:00 PM
  1. Monte Carlo Likelihood for genetic analyses and 2. Coalescents, phylogenies, and disequilibrium mapping
Elizabeth Thompson
08:00 AM - 05:00 PM
  How are centimeter-long chromosomes dealt with inside micron-scalecells?
John Marko
08:00 AM - 05:00 PM
  Construction of human expressed sequence tag (EST) contigs and their usein estimating gene number
Philip Green
08:00 AM - 05:00 PM
  Elastic properties of twisted stretched single DNA
David Bensimon
08:00 AM - 05:00 PM
  Linkage Analysis of Complex Human Traits Using Identity by Descent Data
Sandrine Dudoit
08:00 AM - 05:00 PM
  RNA Structure and Function
Ignacio Tinoco
08:00 AM - 05:00 PM
  Singular Value Decomposition for Genome-Wide Expression Data Processing and Modeling
Orly Alter
08:00 AM - 05:00 PM
  Large-scale conformational properties of DNA
Alexander Vologodskii
08:00 AM - 05:00 PM
  Modern Theory of Gel Electrophoresis
Steve Levene
08:00 AM - 05:00 PM
  DNA Knots
De Witt Sumners
08:00 AM - 05:00 PM
  Basic Biology for NonBiologists
Sylvia Spengler
08:00 AM - 05:00 PM
  Molecular Dynamics Simulation of Proteins and Nucleic Acids
Michael Levitt
08:00 AM - 05:00 PM
  Transertion, gene silencing, and DNA supercoiling in bacteria
James Wang
08:00 AM - 05:00 PM
  Prediction and design of protein structures and folding mechanisms
David Baker
08:00 AM - 05:00 PM
  Some Combinatorial and Algorithmic Problems Related to DNA Microarrays
Richard Karp
08:00 AM - 05:00 PM
  Mechanisms of DNA Unlinking and Chromosome Segregation
Nick Cozzarelli
08:00 AM - 05:00 PM
  DNA Sequence and Three-dimensional Structure
Wilma Olson
08:00 AM - 05:00 PM
  The Mathematics of Gene Recognition
Lior Pachter
08:00 AM - 05:00 PM
  Protein Structure Prediction
Ram Samudrala
08:00 AM - 05:00 PM
  Molecular evolution and database searching
Terry Speed
08:00 AM - 05:00 PM
  Chromosome maps
Terry Speed